We sincerely thank Mr. T. Sugita for his kind gifts of paddy rice. This study was partly supported by a Grant-in-Aid for Young Scientists (Start-up) (No. 21880053) from the Japan Society for the Promotion of Science, and a research grant for production of valuable livestock by feeding self-sufficient forage crops from the Ministry of Agriculture, Forestry

and Fisheries of Japan. “
“Nattokinase (subtilisin NAT, NK) is a relatively effective microbial fibrinolytic enzyme that has been identified and characterized from Bacillus natto. In the current report, DNA family shuffling was used to improve the fibrinolytic activity of nattokinase. Three homologous genes from B. nattoAS 1.107, Bacillus amyloliquefaciensCICC 20164 and Bacillus licheniformisCICC 10092 were shuffled to generate a mutant library. A plate-based method was used to screen the mutant libraries buy Bafilomycin A1 for improved activity. After three rounds of DNA shuffling, one

desirable mutant with 16 amino acid substitutions was obtained. The mutant enzyme was purified and selleck kinase inhibitor characterized. The kinetic measurements showed that the catalytic efficiency of the mutant NK was approximately 2.3 times higher than that of the wild-type nattokinase. In addition, the molecular modeling analysis suggested that the mutations affect the enzymatic function by changing the surface conformation of the substrate-binding pocket. The current study shows that the evolution of nattokinase with improved fibrinolytic activity by DNA family shuffling is feasible and provides useful references Ribose-5-phosphate isomerase to facilitate the application of nattokinase in thrombolytic therapy. Thrombotic diseases, especially acute myocardial infarction, imperil the human lives and health in modern life. Compared with widely used thrombolytic agents, such as tissue plasminogen activator (t-PA) and urokinase (Mukhametova et al.,

2002), several cheaper and safer resources have been extensively investigated over the years (Nakanishi et al., 1994; Moriyama & Takaoka, 2006). Among them, nattokinase (NK), which was extracted from a traditional Japanese fermented natto, has attracted interest. The molecular mass and isoelectric point of NK are about 28 kD and 8.6 respectively. NK has sufficient stability of pH and temperature to be stable in the gastrointestinal tract (Sumi et al., 1987). NK directly cleaves cross-linked fibrin in vitro, catalyzes the conversion of plasminogen to plasmin or inactivates the fibrinolysis inhibitor (PAI-1) (Fujita et al., 1993; Urano et al., 2001). Until recently, most studies of NK have focused on its thrombolytic mechanism, effects, heterologous expression and purification. In vitro molecular-directed evolution is a new strategy that has been used to change the characteristics of enzymes in recent years. The complete nucleotide sequence of the subtilisin NAT aprN has been obtained using shotgun cloning, and the amino acid sequence has been deduced from the DNA sequence (Nakamura et al.